Item Type | Name |
Concept
|
Age Factors
|
Concept
|
Algorithms
|
Concept
|
Breast Neoplasms
|
Concept
|
Alleles
|
Concept
|
Antineoplastic Agents
|
Concept
|
Cell Line, Transformed
|
Concept
|
Animals
|
Concept
|
Computer Simulation
|
Concept
|
Asthma
|
Concept
|
Cooking
|
Concept
|
B-Lymphocytes
|
Concept
|
Base Sequence
|
Concept
|
Cell Nucleus
|
Concept
|
Bacterial Infections
|
Concept
|
Bayes Theorem
|
Concept
|
Autoantigens
|
Concept
|
Pan troglodytes
|
Concept
|
Binding Sites
|
Concept
|
Cell Transformation, Viral
|
Concept
|
Carbamates
|
Concept
|
Chemotaxis
|
Concept
|
Glutathione Transferase
|
Concept
|
Common Cold
|
Concept
|
Darkness
|
Concept
|
Disease
|
Concept
|
DNA Transposable Elements
|
Concept
|
DNA, Mitochondrial
|
Concept
|
Dendritic Cells
|
Concept
|
Diet
|
Concept
|
Dogs
|
Concept
|
Endoderm
|
Concept
|
Exons
|
Concept
|
Mammary Neoplasms, Experimental
|
Concept
|
Introns
|
Concept
|
Genes
|
Concept
|
Genes, Bacterial
|
Concept
|
France
|
Concept
|
Freezing
|
Concept
|
Genetic Complementation Test
|
Concept
|
Obesity
|
Concept
|
Geography
|
Concept
|
Dose-Response Relationship, Drug
|
Concept
|
Herpesvirus 4, Human
|
Concept
|
Leukocytes, Mononuclear
|
Concept
|
Macrophages
|
Concept
|
Madagascar
|
Concept
|
Phospholipase D
|
Concept
|
Macaca mulatta
|
Concept
|
Mycobacterium bovis
|
Concept
|
Myocardial Infarction
|
Concept
|
Models, Genetic
|
Concept
|
Molecular Sequence Data
|
Concept
|
Mycobacterium tuberculosis
|
Concept
|
Mice, Inbred BALB C
|
Concept
|
Mice, Inbred C57BL
|
Concept
|
Mice, Nude
|
Concept
|
Micrococcal Nuclease
|
Concept
|
Molecular Biology
|
Concept
|
Nigeria
|
Concept
|
Lemur
|
Concept
|
Nucleosomes
|
Concept
|
Omentum
|
Concept
|
Ovarian Neoplasms
|
Concept
|
Lipopolysaccharides
|
Concept
|
Nose
|
Concept
|
Olfactory Bulb
|
Concept
|
Osteogenesis
|
Concept
|
Oxygen
|
Concept
|
Primates
|
Concept
|
Pseudogenes
|
Concept
|
Immunoenzyme Techniques
|
Concept
|
Repressor Proteins
|
Concept
|
Regulatory Sequences, Nucleic Acid
|
Concept
|
Ribosomes
|
Concept
|
Cadherins
|
Concept
|
Salmonella typhimurium
|
Concept
|
Seasons
|
Concept
|
Staphylococcus epidermidis
|
Concept
|
RNA Polymerase II
|
Concept
|
Social Environment
|
Concept
|
Smell
|
Concept
|
Humans
|
Concept
|
Body Mass Index
|
Concept
|
Linear Models
|
Concept
|
Transcription, Genetic
|
Concept
|
Protein Biosynthesis
|
Concept
|
Software
|
Concept
|
Tumor Stem Cell Assay
|
Concept
|
Terminator Regions, Genetic
|
Concept
|
Testis
|
Concept
|
Cell Culture Techniques
|
Concept
|
Benchmarking
|
Concept
|
Reverse Transcriptase Polymerase Chain Reaction
|
Concept
|
Tumor Cells, Cultured
|
Concept
|
RNA Splice Sites
|
Concept
|
Models, Animal
|
Concept
|
Transcription Initiation Site
|
Concept
|
Principal Component Analysis
|
Concept
|
HMGA2 Protein
|
Concept
|
Cryopreservation
|
Concept
|
Yersinia pseudotuberculosis
|
Concept
|
Likelihood Functions
|
Concept
|
Mitochondria
|
Concept
|
Gene Expression
|
Concept
|
Myocardium
|
Concept
|
Case-Control Studies
|
Concept
|
RNA Interference
|
Concept
|
Genes, Reporter
|
Concept
|
Neoplasm Metastasis
|
Concept
|
Consensus Sequence
|
Concept
|
DNA, Complementary
|
Concept
|
Cell Proliferation
|
Concept
|
Phosphatidylethanolamine Binding Protein
|
Concept
|
Chemokines
|
Concept
|
Receptors, CCR5
|
Concept
|
Mycobacterium smegmatis
|
Concept
|
Lymphocyte Count
|
Concept
|
CpG Islands
|
Concept
|
Chemokine CCL5
|
Concept
|
Genes, rRNA
|
Concept
|
Position-Specific Scoring Matrices
|
Concept
|
Olfactory Mucosa
|
Concept
|
Single-Cell Analysis
|
Concept
|
Biodiversity
|
Concept
|
MAP Kinase Kinase 4
|
Concept
|
Proteomics
|
Concept
|
Chromatin Assembly and Disassembly
|
Concept
|
YY1 Transcription Factor
|
Concept
|
Microarray Analysis
|
Concept
|
Receptors, Odorant
|
Concept
|
Response Elements
|
Concept
|
Anthracyclines
|
Concept
|
Internet
|
Concept
|
Oligonucleotide Array Sequence Analysis
|
Concept
|
DNA, Intergenic
|
Concept
|
Databases, Genetic
|
Concept
|
Myocytes, Cardiac
|
Concept
|
Interdisciplinary Communication
|
Concept
|
5' Flanking Region
|
Concept
|
Promoter Regions, Genetic
|
Concept
|
Mice
|
Concept
|
Tandem Mass Spectrometry
|
Concept
|
Research Design
|
Concept
|
RNA, Messenger
|
Concept
|
Host-Pathogen Interactions
|
Concept
|
Olfactory Perception
|
Concept
|
Embryoid Bodies
|
Concept
|
Interferon Regulatory Factors
|
Concept
|
Real-Time Polymerase Chain Reaction
|
Concept
|
Regulatory Elements, Transcriptional
|
Concept
|
Temperature
|
Concept
|
Blotting, Western
|
Concept
|
Mitogen-Activated Protein Kinase Phosphatases
|
Concept
|
STAT2 Transcription Factor
|
Concept
|
DNA Copy Number Variations
|
Concept
|
Open Reading Frames
|
Concept
|
2',5'-Oligoadenylate Synthetase
|
Concept
|
Reproducibility of Results
|
Concept
|
DNA Barcoding, Taxonomic
|
Concept
|
Survival Rate
|
Concept
|
DNA Methylation
|
Concept
|
Dual-Specificity Phosphatases
|
Concept
|
Gene Silencing
|
Concept
|
Gene Knockdown Techniques
|
Concept
|
3' Flanking Region
|
Concept
|
Statistics, Nonparametric
|
Concept
|
Cell Lineage
|
Concept
|
Endangered Species
|
Concept
|
Actinobacteria
|
Concept
|
Polyadenylation
|
Concept
|
Transcriptome
|
Concept
|
Genome-Wide Association Study
|
Concept
|
Metabolomics
|
Concept
|
Molecular Sequence Annotation
|
Concept
|
Integrin alpha2
|
Concept
|
Cell Line, Tumor
|
Concept
|
Toll-Like Receptors
|
Concept
|
Metagenome
|
Concept
|
Latent Tuberculosis
|
Concept
|
Induced Pluripotent Stem Cells
|
Concept
|
Epigenomics
|
Concept
|
Diet, High-Fat
|
Concept
|
Cell Line
|
Concept
|
Cells, Cultured
|
Concept
|
Chlorambucil
|
Concept
|
Chromatin
|
Concept
|
Data Interpretation, Statistical
|
Concept
|
Deoxyribonuclease I
|
Concept
|
Doxorubicin
|
Concept
|
Drug Screening Assays, Antitumor
|
Concept
|
Enhancer Elements, Genetic
|
Concept
|
Lymphocytes
|
Concept
|
Monocytes
|
Concept
|
Papio
|
Concept
|
Tuberculosis
|
Concept
|
Statistical Distributions
|
Concept
|
Conserved Sequence
|
Concept
|
Disease-Free Survival
|
Concept
|
Computational Biology
|
Concept
|
Viral Load
|
Concept
|
Genetic Predisposition to Disease
|
Concept
|
Polymorphism, Single Nucleotide
|
Concept
|
Genomics
|
Concept
|
Membrane Transport Proteins
|
Concept
|
MicroRNAs
|
Concept
|
Quantitative Trait Loci
|
Concept
|
Gastrointestinal Tract
|
Concept
|
5-Methylcytosine
|
Concept
|
Scavenger Receptors, Class A
|
Concept
|
INDEL Mutation
|
Concept
|
Molecular Dynamics Simulation
|
Concept
|
Genetic Loci
|
Concept
|
Microbial Consortia
|
Concept
|
HapMap Project
|
Academic Article
|
Sex-specific genetic architecture of human disease.
|
Academic Article
|
Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data.
|
Academic Article
|
Sex-specific and lineage-specific alternative splicing in primates.
|
Academic Article
|
Understanding mechanisms underlying human gene expression variation with RNA sequencing.
|
Academic Article
|
Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data.
|
Academic Article
|
Noisy splicing drives mRNA isoform diversity in human cells.
|
Academic Article
|
The effects of EBV transformation on gene expression levels and methylation profiles.
|
Academic Article
|
Genomic-scale capture and sequencing of endogenous DNA from feces.
|
Academic Article
|
Exon-specific QTLs skew the inferred distribution of expression QTLs detected using gene expression array data.
|
Academic Article
|
Characterizing natural variation using next-generation sequencing technologies.
|
Academic Article
|
Genomics: ENCODE explained.
|
Academic Article
|
Dissecting the regulatory architecture of gene expression QTLs.
|
Academic Article
|
Time-dependent transcriptional profiling links gene expression to mitogen-activated protein kinase kinase 4 (MKK4)-mediated suppression of omental metastatic colonization.
|
Academic Article
|
The contribution of RNA decay quantitative trait loci to inter-individual variation in steady-state gene expression levels.
|
Academic Article
|
Revealing the architecture of gene regulation: the promise of eQTL studies.
|
Academic Article
|
Expression quantitative trait loci detected in cell lines are often present in primary tissues.
|
Academic Article
|
The combination of a genome-wide association study of lymphocyte count and analysis of gene expression data reveals novel asthma candidate genes.
|
Academic Article
|
Using genomic tools to study regulatory evolution.
|
Academic Article
|
DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines.
|
Academic Article
|
A genome-wide study of DNA methylation patterns and gene expression levels in multiple human and chimpanzee tissues.
|
Academic Article
|
False positive peaks in ChIP-seq and other sequencing-based functional assays caused by unannotated high copy number regions.
|
Academic Article
|
Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".
|
Academic Article
|
Regulatory element copy number differences shape primate expression profiles.
|
Academic Article
|
Comparative studies of gene expression and the evolution of gene regulation.
|
Academic Article
|
Functional comparison of innate immune signaling pathways in primates.
|
Academic Article
|
Gene expression differences among primates are associated with changes in a histone epigenetic modification.
|
Academic Article
|
A genome sequence resource for the aye-aye (Daubentonia madagascariensis), a nocturnal lemur from Madagascar.
|
Academic Article
|
Comparative RNA sequencing reveals substantial genetic variation in endangered primates.
|
Academic Article
|
DNase?I sensitivity QTLs are a major determinant of human expression variation.
|
Academic Article
|
Social environment is associated with gene regulatory variation in the rhesus macaque immune system.
|
Academic Article
|
High-resolution mapping of expression-QTLs yields insight into human gene regulation.
|
Academic Article
|
Gene regulation in primates evolves under tissue-specific selection pressures.
|
Academic Article
|
Deciphering the genetic architecture of variation in the immune response to Mycobacterium tuberculosis infection.
|
Academic Article
|
Controls of nucleosome positioning in the human genome.
|
Academic Article
|
Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: evaluation of effective study designs.
|
Academic Article
|
General olfactory sensitivity database (GOSdb): candidate genes and their genomic variations.
|
Academic Article
|
Comparative studies of gene regulatory mechanisms.
|
Academic Article
|
The effect of freeze-thaw cycles on gene expression levels in lymphoblastoid cell lines.
|
Academic Article
|
Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels.
|
Academic Article
|
Social environmental effects on gene regulation.
|
Academic Article
|
Epigenetic modifications are associated with inter-species gene expression variation in primates.
|
Academic Article
|
Reprogramming LCLs to iPSCs Results in Recovery of Donor-Specific Gene Expression Signature.
|
Academic Article
|
The genetic and mechanistic basis for variation in gene regulation.
|
Academic Article
|
Genomic variation. Impact of regulatory variation from RNA to protein.
|
Academic Article
|
Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes.
|
Academic Article
|
Identification of genetic variants that affect histone modifications in human cells.
|
Academic Article
|
The genetic architecture of gene expression levels in wild baboons.
|
Academic Article
|
Primate transcript and protein expression levels evolve under compensatory selection pressures.
|
Academic Article
|
Does a unique olfactory genome imply a unique olfactory world?
|
Academic Article
|
Seasonal variation in human gut microbiome composition.
|
Academic Article
|
The functional consequences of variation in transcription factor binding.
|
Academic Article
|
Host genetic variation influences gene expression response to rhinovirus infection.
|
Academic Article
|
Comparative metabolomics in primates reveals the effects of diet and gene regulatory variation on metabolic divergence.
|
Academic Article
|
RNA-seq: impact of RNA degradation on transcript quantification.
|
Academic Article
|
A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics.
|
Academic Article
|
A reanalysis of mouse ENCODE comparative gene expression data.
|
Academic Article
|
msCentipede: Modeling Heterogeneity across Genomic Sites and Replicates Improves Accuracy in the Inference of Transcription Factor Binding.
|
Academic Article
|
Metastasis Suppressors Regulate the Tumor Microenvironment by Blocking Recruitment of Prometastatic Tumor-Associated Macrophages.
|
Academic Article
|
WASP: allele-specific software for robust molecular quantitative trait locus discovery.
|
Academic Article
|
Genome-Wide Association Studies of the Human Gut Microbiota.
|
Academic Article
|
Mycobacterial infection induces a specific human innate immune response.
|
Academic Article
|
Bacterial infection remodels the DNA methylation landscape of human dendritic cells.
|
Academic Article
|
Synthesis, biological studies and molecular dynamics of new anticancer RGD-based peptide conjugates for targeted drug delivery.
|
Academic Article
|
Genetic Variation, Not Cell Type of Origin, Underlies the Majority of Identifiable Regulatory Differences in iPSCs.
|
Academic Article
|
Nasal Microbiome Composition Is Associated with Chitotriosidase (Chit1) Activity in Adult Hutterites.
|
Academic Article
|
RNA splicing is a primary link between genetic variation and disease.
|
Academic Article
|
Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling.
|
Academic Article
|
The human olfactory transcriptome.
|
Academic Article
|
Integrated analyses of gene expression and genetic association studies in a founder population.
|
Academic Article
|
DNA methylation in lung cells is associated with asthma endotypes and genetic risk.
|
Academic Article
|
Gene expression in local stroma reflects breast tumor states and predicts patient outcome.
|
Academic Article
|
Batch effects and the effective design of single-cell gene expression studies.
|
Academic Article
|
Host genetic variation in mucosal immunity pathways influences the upper airway microbiome.
|
Academic Article
|
Dual-drug RGD conjugates provide enhanced cytotoxicity to melanoma and non-small lung cancer cells.
|
Academic Article
|
Reducing mitochondrial reads in ATAC-seq using CRISPR/Cas9.
|
Academic Article
|
Impact of regulatory variation across human iPSCs and differentiated cells.
|
Academic Article
|
Silencing of transposable elements may not be a major driver of regulatory evolution in primate iPSCs.
|
Academic Article
|
A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes.
|
Academic Article
|
Human genomics: Cracking the regulatory code.
|
Academic Article
|
A comparative study of endoderm differentiation in humans and chimpanzees.
|
Academic Article
|
A Comparative Assessment of Human and Chimpanzee iPSC-derived Cardiomyocytes with Primary Heart Tissues.
|
Academic Article
|
Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells.
|
Academic Article
|
Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes.
|
Academic Article
|
A generally conserved response to hypoxia in iPSC-derived cardiomyocytes from humans and chimpanzees.
|
Academic Article
|
Discovery and characterization of variance QTLs in human induced pluripotent stem cells.
|
Academic Article
|
Dynamic genetic regulation of gene expression during cellular differentiation.
|
Academic Article
|
Reorganization of 3D genome structure may contribute to gene regulatory evolution in primates.
|
Academic Article
|
A comparison of gene expression and DNA methylation patterns across tissues and species.
|
Academic Article
|
Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation.
|
Academic Article
|
Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis.
|
Academic Article
|
Effective study design for comparative functional genomics.
|
Academic Article
|
Prime time for primate functional genomics.
|
Academic Article
|
Alternative polyadenylation mediates genetic regulation of gene expression.
|
Academic Article
|
Where Are the Disease-Associated eQTLs?
|
Academic Article
|
Gene expression variability in human and chimpanzee populations share common determinants.
|
Academic Article
|
A TAD Skeptic: Is 3D Genome Topology Conserved?
|
Academic Article
|
Dynamic effects of genetic variation on gene expression revealed following hypoxic stress in cardiomyocytes.
|
Academic Article
|
Divergence in alternative polyadenylation contributes to gene regulatory differences between humans and chimpanzees.
|
Academic Article
|
Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions.
|
Academic Article
|
Benchmarking sequencing methods and tools that facilitate the study of alternative polyadenylation.
|
Academic Article
|
Single-cell sequencing reveals lineage-specific dynamic genetic regulation of gene expression during human cardiomyocyte differentiation.
|
Academic Article
|
Human embryoid bodies as a novel system for genomic studies of functionally diverse cell types.
|
Academic Article
|
Evolutionary insights into primate skeletal gene regulation using a comparative cell culture model.
|
Concept
|
Gastrointestinal Microbiome
|
Concept
|
Protein Domains
|
Concept
|
CCCTC-Binding Factor
|
Concept
|
Gene Ontology
|
Concept
|
CRISPR-Cas Systems
|
Concept
|
Microbiota
|
Concept
|
Triple Negative Breast Neoplasms
|
Concept
|
Cardiotoxicity
|
Concept
|
Datasets as Topic
|
Grant
|
A National iPS Cell Network with Deep Phenotyping for Translational Research
|
Academic Article
|
Guided Differentiation of Pluripotent Stem Cells for Cardiac Cell Diversity.
|
Academic Article
|
Genetic regulatory effects in response to a high cholesterol, high fat diet in baboons.
|
Academic Article
|
The relationship between regulatory changes in cis and trans and the evolution of gene expression in humans and chimpanzees.
|
Academic Article
|
Induced Pluripotent Stem Cells in Disease Biology and the Evidence for Their In Vitro Utility.
|
Academic Article
|
Genetic regulatory effects in response to a high-cholesterol, high-fat diet in baboons.
|